API Reference

btrack Package

Classes

BayesianTracker([verbose])

BayesianTracker.

btrack.btypes Module

Classes

PyTrackObject()	The base btrack track object.
Tracklet(ID, data, *[, parent, children, fate])	A btrack Tracklet object used to store track information.

btrack.models Module

Classes

MotionModel(*, measurements, states, A, H, P, R)	The btrack motion model.
ObjectModel(*, states, emission, transition, ...)	The btrack object model.
HypothesisModel(*, hypotheses, lambda_time, ...)	The btrack hypothesis model.

btrack.io Package

Functions

export_CSV(filename, tracks[, properties, ...])	Export the track data as a simple CSV file.
export_delegator(filename, tracker[, ...])	Export data from the tracker using the appropriate exporter.
export_LBEP(filename, tracks)	Export the LBEP table as a text file.
import_CSV(filename)	Import localizations from a CSV file.
localizations_to_objects(localizations)	Take a numpy array or pandas dataframe and convert to PyTrackObjects.
segmentation_to_objects(segmentation, *[, ...])	Convert segmentation to a set of trackable objects.
objects_from_array(objects_arr, *[, ...])	Construct PyTrackObjects from a numpy array.
objects_from_dict(objects_dict)	Construct PyTrackObjects from a dictionary

Classes

HDF5FileHandler(filename[, read_write, obj_type])

Generic HDF5 file hander for reading and writing datasets.

btrack.utils Module

Functions

segmentation_to_objects(segmentation, *[, ...])	Convert segmentation to a set of trackable objects.
update_segmentation(segmentation, tracks, *)	Map tracks back into a masked array.